Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788192.1_cds_XP_016451672.1_432
CDS Infomation

[gene=LOC107776284] [db_xref=GeneID:107776284] [protein=putative late blight resistance protein homolog R1A-10] [protein_id=XP_016451672.1] [location=join(3038..5394,5718..5951,6595..6649)] [gbkey=CDS]
Sequence

ATGGAGGATGTCAACATTGATGAGAGTGCTACACCAAGTACTCAAGTAACTGAAGAGGAA
CCGCTGGGGCTTGAGGATGATGCTGAGAAGATAATTAAGCTACTGACCAGAGGAATAAGG
GAACGGGATATTGTCTCTATTTTTGGCATGCCTGGTCTCGGAAAGACCACTTTGGCAAAA
AAGATATTCAAAGATTCTTCTATTGTTTCTCACTTTGATGTTCGAGCATGGGTTATCATT
TCGCAATCATATGATGTGAGAGAGCTGTTGAGGGACATCTATAAGCAAGTGACAGGTGTT
AAGTGCAGTGGAGATAAGGAGAGTGACATAGCCGATATGTTGCGCAAGTGTTTAATAGGG
AAAAGATATCTCATTGTTTTGGATGATGTATGGGAAGTAAAGGCATGGGATGAGTTAAGA
TTATGTTTTCCAATCGGTAAACAAGGAAGCAGAATCATGTTAACAACTCGACTTGAACAT
GTGGCAATGGAAGTCGAGCACTGTGCCGATCCTTATTCCCCTCGATTCCTAACCAGGGAA
GCAAGCTGGAAATTGTTGGAGAAAAAAGCATTTCAAAAGGAAACTTGCCCTCCTGAATTC
AAGGATGTTGGGGTACAAATTGCAGAATATTGTAAAGGGCTGCCTCTTACAGTTGTTTTG
GTTGGTGGAATTCTGGCAAAGAAAGAAAGGAATGTCTCGGAGTGGTGTGAAGTTGCAAAC
AATTTAAAGTCTCATCTTGGAGCAGTTGAAAGTGAGAGCAACTTGGCAATACAATTAAGT
TACTGCTATTTACCGGATCATTTGAGACATTGCCTTCTAACTATGGGAGTATTTAGGGAG
GATGAAAAAATTGGCCCATCTAAATTGATGTTACTCTGGATGGCCGAAGGCCTCGTTCAA
TGTAGTGATGAGAGAGGATTGGAGGAGGTAGCTGAAGTTTACTTGACCGATATAATTTCA
AGTAGCCTACTAATGGTTTCAAAGACGACCTTTGATGGCAAGGTGAAGTACTTGCAAATT
CATGATCTAGTGCGTGACTTTGTCTTAAACAAAGCTAAAGAAGAAAAATTCATGCAAGTT
ATAGGGACACATAACCAATATCAACCTTCATATGATGAAGAACATCGAGTGTGCATTCAC
CTCGACCATAAGCTTCGTCATGATTTGCAGAGATTCGACAACGAAGTAGATAGATTCCTC
ACAAGCGGCTCAAAAAAAGGAACATCTTTTGGACAAGATCTTAAATCGTTCTTTGTTACT
AATAACGCGGATGATTTTCTTGCTTATAGAGATTTTTGGAATAGTGAGTCTAGTTTTCAC
GGTACTATTTCTGAAGAGTATTTATCTCGTTCCTATCATTTCTCATCAGTTGGAGACTTA
AGACTTCTTAGAGTGCTGGATATCAAGAACTGCATTCCAGGGGATTATACGAATATAGAA
GATATATTGCAATCACTAGTTTACCTGAGATACCTGGGAATGTGTTTCGAAAAGTTTTTT
TTCGAGTGGGTATCACACATGTGCGATCTGGAAACTTTACTGGTGGATACTGAGATATCA
GTAGAAGGGACACCTCATATTTGGAAGATGACAAAATTAAAGCATGTAGACGTATCAACA
CGCTTACCTCATGAGATATTTGCAGTTTCTGAAGAAGGTCCGTCTAAGTTGGAGAATTTG
AGGGCATTTAAAGGCATGTGTTTATTTCGTGAGGATATAGAGTTAATTGAGATGTTTCCC
AATCTTCAAAAGCTTCTCCTCGTAATAATTGTTAATTATTTAGATGAAGCTGAAGTTAAT
GATTTTGATGAAGCTGAAGTTAATAATTTTGGTGAAGCTAACTCTCTCGTTCTGAAATTG
GATGTTCTTACACAGCTTCAATCTCTCGTGTTTGGTTCGATGTATAATATCACCAAGTAT
TATTTACCTTCAAGTCTCAAAGAGCTGATCCTCCGCCAAATTAATATACTAGCAAGTGCA
ACTTCCACAATTGCTGGGTTACCCAACCTTCAAAGACTGGTATTTCAAGGGTGTAGATTC
GAGCAAGAGGAGTGGGACGTGAGAGATATGGAGTTCCCGGTACTCAAAATCTTAAAATTT
CGAGGCGTTCATATTAGGGAATGGCACGTCTTAGAATCATCATCATTTCCCATGCTTGAA
AGTTTAGTGCTAAAATCTGTTGAATTGCTTGAGAAGATTCCTGACAGTTTTGTGGATATT
GGAACGCTTACATCAATCAAGGTGATCCATTGTAATCAAAACTCCCTCAAGGTTTCAGCT
TTGGAGATTAAGGAAGAAGTAGAAGCAACTACAGGGTGTGACAACCTGGACGTCTATATT
TTTCCTCCTTACTCTCGAAATGAAACCAAAAGAATTACAGATGATCAGGCGTCTGAGTTC
AAGGAAATATTCAGCCGATTTGACCTGGATCAGGATGGATTTATTATTGCAGCTGATCTT
CGCCATTTCATGGCAAACAGAGACAAGGCACCACCTACAGATGAAGAGGTTGATGAGTTA
ATTCGTGAAGCTGACGTGGATGGTGATGGACGGATCAGCTATGAGGAGTTCGTCAACTAC
ATGATGGCCATGAAAAGTGCCGAAGAAGAGGGCGGGGATGAGGAAGGAGAAAAGGAAGAG
GAATAA

Peptide Sequence

PEP ID

XP_016451672.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1A-10 [Nicotiana tabacum]
Sequence

MEDVNIDESATPSTQVTEEEPLGLEDDAEKIIKLLTRGIRERDIVSIFGMPGLGKTTLAK
KIFKDSSIVSHFDVRAWVIISQSYDVRELLRDIYKQVTGVKCSGDKESDIADMLRKCLIG
KRYLIVLDDVWEVKAWDELRLCFPIGKQGSRIMLTTRLEHVAMEVEHCADPYSPRFLTRE
ASWKLLEKKAFQKETCPPEFKDVGVQIAEYCKGLPLTVVLVGGILAKKERNVSEWCEVAN
NLKSHLGAVESESNLAIQLSYCYLPDHLRHCLLTMGVFREDEKIGPSKLMLLWMAEGLVQ
CSDERGLEEVAEVYLTDIISSSLLMVSKTTFDGKVKYLQIHDLVRDFVLNKAKEEKFMQV
IGTHNQYQPSYDEEHRVCIHLDHKLRHDLQRFDNEVDRFLTSGSKKGTSFGQDLKSFFVT
NNADDFLAYRDFWNSESSFHGTISEEYLSRSYHFSSVGDLRLLRVLDIKNCIPGDYTNIE
DILQSLVYLRYLGMCFEKFFFEWVSHMCDLETLLVDTEISVEGTPHIWKMTKLKHVDVST
RLPHEIFAVSEEGPSKLENLRAFKGMCLFREDIELIEMFPNLQKLLLVIIVNYLDEAEVN
DFDEAEVNNFGEANSLVLKLDVLTQLQSLVFGSMYNITKYYLPSSLKELILRQINILASA
TSTIAGLPNLQRLVFQGCRFEQEEWDVRDMEFPVLKILKFRGVHIREWHVLESSSFPMLE
SLVLKSVELLEKIPDSFVDIGTLTSIKVIHCNQNSLKVSALEIKEEVEATTGCDNLDVYI
FPPYSRNETKRITDDQASEFKEIFSRFDLDQDGFIIAADLRHFMANRDKAPPTDEEVDEL
IREADVDGDGRISYEEFVNYMMAMKSAEEEGGDEEGEKEEE

Transcript Sequence

Gene sequence data has not been registered.